Protein Information

Protein ZmCOL7
ZmCOL7 is a protein in the C2C2-CO-like family.
Information
TF Name:	ZmCOL7
Species:	Maize
TF Family:	C2C2-CO-like
Gene Name(Synonym):	COL7
Uniprot ID:	K7UJZ2
Subgenome:	2

Overview of domains present in v5 transcripts
	PF00643	PF06203
Zm00001eb425790_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d025770	DAPseq	sequence	fimo	position
Zm00001d025770	DAPseq	sequence	fimo	position
Zm00001d025770	ChIPseq	sequence	fimo	position
Zm00001d025770	PChIPseq	sequence	fimo	position

Zm00001eb425790_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MKGDEKSAGGAPAYWGLGARPCDACGAEAARLYCRADAAFLCAGCDARAHGAGSRHARVWLCEVCEHAPAAVTCRADAAA
LCASCDADIHSANPLASRHERLPVAPFFGELADAPKPFASSAAVPKAADDDGSNEAEAASWLLPEPDHGQKEGATTEVFF
ADSDPYLDLDFARSMDDIKTIGVQGGPPELDLAGAKLFYSDDSMNHSVSSSEAAVVPDAVAGAAPEVAVVCRGLEREARL
MRYREKRKSRRFDKTIRYASRKAYAETRPRIKGRFAKRTPGAGADGEEPLEEHEEIYSSAAAAVAALMAPGGADADYGVV
PTH

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00643
PF00643
PF06203
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Nucleotide Sequence
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TGTCACGACGTCCGCCTAAATTTTT...

AC233888.1_FGT002 from maize genome v3

Related TFome: pUT6100

Amino Acid Sequence
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MKGDEKSAGGAPAYWGLGARPCDACGAEAARLYCRADAAFLCAGCDARAHGAGSRHARVWLCEVCEHAPAAVTCRADAAA
LCASCDADIHSANPLASRHERLPVAPFFGELADAPKPFASSAAVPKAADDDGSNEAEAASWLLPEPDHGQKEGATTEVFF
ADSDPYLDLDFARSMDDIKTIGVQGGPPELDLAGAKLFYSDDSMNHSVSSSEAAVVPDAVAGAAPEVAVVCRGLEREARL
MRYREKRKSRRFDKTIRYASRKAYAETRPRIKGRFAKRTPGAGADGEEPLEEHEEIYSSAAAAVAALMAPGGADADYGVV
PTH

Nucleotide Sequence
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ATGAAGGGTGACGAGAAGTCGGCGG...

Zm00001d025770_T001 from maize genome v4

Amino Acid Sequence
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MKGDEKSAGGAPAYWGLGARPCDACGAEAARLYCRADAAFLCAGCDARAHGAGSRHARVWLCEVCEHAPAAVTCRADAAA
LCASCDADIHSANPLASRHERLPVAPFFGELADAPKPFASSAAVPKAADDDGSNEAEAASWLLPEPDHGQKEGATTEVFF
ADSDPYLDLDFARSMDDIKTIGVQGGPPELDLAGAKLFYSDDSMNHSVSSSEAAVVPDAVAGAAPEVAVVCRGLEREARL
MRYREKRKSRRFDKTIRYASRKAYAETRPRIKGRFAKRTPGAGADGEEPLEEHEEIYSSAAAAVAALMAPGGADADYGVV
PTH

Nucleotide Sequence
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GGCACGGGCCCGCAACCCGATGGCC...

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Protein ZmCOL7

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmCOL7 is the regulator
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Interactions where ZmCOL7 is the target
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Zm00001eb425790_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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AC233888.1_FGT002 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d025770_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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